Sequence Similarity Clusters for the Entities in PDB 1LPB

Entity #1 | Chains: A
COLIPASE protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16306
95 % 1 6 11095 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 1 6 10939
70 % 1 6 10339
50 % 1 6 9304
40 % 1 6 8414
30 % 1 6 7277
Entity #2 | Chains: B
LIPASE protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25359
95 % 1 3 22389 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.9
PDBFlex
90 % 1 3 21692
70 % 4 10 4791
50 % 6 12 4079
40 % 6 12 3864
30 % 6 12 3527

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures