Sequence Similarity Clusters for the Entities in PDB 1LPB

Entity #1 | Chains: A
COLIPASE protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15494
95 % 1 6 10490 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 6 10354
70 % 1 6 9811
50 % 1 6 8893
40 % 1 6 8141
30 % 1 6 7165
Entity #2 | Chains: B
LIPASE protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 24698
95 % 1 3 20956 Flexibility: Medium
Max RMSD: 4.2, Avg RMSD: 4.2
PDBFlex
90 % 1 3 20376
70 % 4 10 4394
50 % 6 12 3686
40 % 6 12 3547
30 % 6 12 3315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.