Sequence Similarity Clusters for the Entities in PDB 1LPA

Entity #1 | Chains: A
COLIPASE protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47435
95 % 3 6 10831 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 3 6 10687
70 % 3 6 10138
50 % 3 6 9177
40 % 3 6 8395
30 % 3 6 7396
Entity #2 | Chains: B
LIPASE protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25532
95 % 2 3 21671 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.9
PDBFlex
90 % 2 3 21063
70 % 6 10 4544
50 % 8 12 3794
40 % 8 12 3644
30 % 8 12 3407

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.