Sequence Similarity Clusters for the Entities in PDB 1LP1

Entity #1 | Chains: A
Affibody binding protein Z protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48119
95 % 1 2 35954
90 % 1 2 34354
70 % 13 37 1135
50 % 13 37 1177
40 % 13 37 1186
30 % 13 37 1160
Entity #2 | Chains: B
Immunoglobulin G binding protein A protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 10722
95 % 1 11 6072
90 % 6 16 2873
70 % 14 37 1135
50 % 14 37 1177
40 % 14 37 1186
30 % 14 37 1160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.