Sequence Similarity Clusters for the Entities in PDB 1LOP

Entity #1 | Chains: A
CYCLOPHILIN A protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55653
95 % 1 3 24950 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 3 24099
70 % 1 3 21874
50 % 3 9 6147
40 % 3 9 5711
30 % 135 254 142
Entity #2 | Chains: B
SUCCINYL-ALA-PRO-ALA-P-NITROANILIDE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures