Sequence Similarity Clusters for the Entities in PDB 1LOP

Entity #1 | Chains: A
CYCLOPHILIN A protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60984
95 % 1 3 22588
90 % 1 3 21869
70 % 1 3 20047
50 % 3 9 5591
40 % 3 9 5235
30 % 122 238 135
Entity #2 | Chains: B
SUCCINYL-ALA-PRO-ALA-P-NITROANILIDE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.