Sequence Similarity Clusters for the Entities in PDB 1LOL

Entity #1 | Chains: A,B
orotidine 5'-monophosphate decarboxylase protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 4078
95 % 110 114 132 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 110 114 136
70 % 110 114 158
50 % 110 114 188
40 % 117 122 195
30 % 121 127 200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures