Sequence Similarity Clusters for the Entities in PDB 1LOG

Entity #1 | Chains: A,C
LEGUME ISOLECTIN I (ALPHA CHAIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 2078
95 % 3 10 2053
90 % 10 19 1126
70 % 10 20 1118
50 % 10 20 1164
40 % 10 20 1183
30 % 10 20 1161
Entity #2 | Chains: B,D
LEGUME ISOLECTIN I (BETA CHAIN) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 2111
95 % 3 10 2087
90 % 3 10 2146
70 % 10 20 1122
50 % 10 20 1166
40 % 10 20 1187
30 % 10 20 1165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.