Sequence Similarity Clusters for the Entities in PDB 1LOF

Entity #1 | Chains: A
LEGUME ISOLECTIN I (ALPHA CHAIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 2255
95 % 7 10 2233
90 % 14 19 1216
70 % 14 20 1195
50 % 14 20 1250
40 % 14 20 1265
30 % 14 20 1238
Entity #2 | Chains: B
LEGUME ISOLECTIN I (BETA CHAIN) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 2294
95 % 7 10 2257
90 % 7 10 2323
70 % 14 20 1200
50 % 14 20 1256
40 % 14 20 1272
30 % 14 20 1245
Entity #3 | Chains: C
LEGUME ISOLECTIN I (ALPHA CHAIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61692
95 % 8 10 2233
90 % 15 19 1216
70 % 15 20 1195
50 % 15 20 1250
40 % 15 20 1265
30 % 15 20 1238
Entity #4 | Chains: D
LEGUME ISOLECTIN I (BETA CHAIN) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72219
95 % 8 10 2257
90 % 8 10 2323
70 % 15 20 1200
50 % 15 20 1256
40 % 15 20 1272
30 % 15 20 1245

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.