Sequence Similarity Clusters for the Entities in PDB 1LOB

Entity #1 | Chains: A,C,E,G
LEGUME ISOLECTIN I (ALPHA CHAIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 2125
95 % 2 10 2099
90 % 7 19 1147
70 % 7 20 1138
50 % 7 20 1190
40 % 7 20 1205
30 % 7 20 1177
Entity #2 | Chains: B,D,F,H
LEGUME ISOLECTIN I (BETA CHAIN) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 2157
95 % 2 10 2125
90 % 2 10 2191
70 % 7 20 1144
50 % 7 20 1193
40 % 7 20 1210
30 % 7 20 1182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.