Sequence Similarity Clusters for the Entities in PDB 1LOA

Entity #1 | Chains: A,C,E,G
LEGUME ISOLECTIN I (ALPHA CHAIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 2164
95 % 6 10 2133
90 % 13 19 1174
70 % 13 20 1156
50 % 13 20 1208
40 % 13 20 1219
30 % 13 20 1193
Entity #2 | Chains: B,D,F,H
LEGUME ISOLECTIN I (BETA CHAIN) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 2197
95 % 6 10 2161
90 % 6 10 2229
70 % 13 20 1163
50 % 13 20 1212
40 % 13 20 1226
30 % 13 20 1201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.