Sequence Similarity Clusters for the Entities in PDB 1LO2

Entity #1 | Chains: L,X
If kappa light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13071
95 % 48 146 149
90 % 52 156 149
70 % 602 2392 1
50 % 1236 4843 1
40 % 1236 4843 1
30 % 1378 5705 1
Entity #2 | Chains: H,Y
Ig gamma 2a heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13060
95 % 2 3 12559
90 % 2 3 12369
70 % 597 2342 2
50 % 1237 4843 1
40 % 1237 4843 1
30 % 1379 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures