Sequence Similarity Clusters for the Entities in PDB 1LO0

Entity #1 | Chains: L,X
If kappa light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 11730
95 % 46 138 145
90 % 46 143 150
70 % 412 1704 2
50 % 1027 4154 1
40 % 1027 4155 1
30 % 1126 4901 1
Entity #2 | Chains: H,Y
Ig gamma 2a heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 11720
95 % 1 3 11314
90 % 1 3 11149
70 % 496 2010 1
50 % 1028 4154 1
40 % 1028 4155 1
30 % 1127 4901 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.