Sequence Similarity Clusters for the Entities in PDB 1LNX

Entity #1 | Chains: A,B,C,D,E,F,G
small nuclear ribonucleoprotein homolog (Sm-like) protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4273
95 % 2 2 5071 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 5085
70 % 2 2 4959
50 % 2 2 4744
40 % 2 2 4505
30 % 2 2 4131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures