Sequence Similarity Clusters for the Entities in PDB 1LNX

Entity #1 | Chains: A,B,C,D,E,F,G
small nuclear ribonucleoprotein homolog (Sm-like) protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4345
95 % 2 2 5140 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 5160
70 % 2 2 5030
50 % 2 2 4804
40 % 2 2 4552
30 % 2 2 4183

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures