Sequence Similarity Clusters for the Entities in PDB 1LNW

Entity #1 | Chains: A,B,C,D,E,F,G,H
Multidrug resistance operon repressor protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9876
95 % 3 3 6213 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 2.1
PDBFlex
90 % 3 3 6215
70 % 3 3 6053
50 % 3 3 5675
40 % 3 3 5328
30 % 3 3 4793

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures