Sequence Similarity Clusters for the Entities in PDB 1LNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H
POTASSIUM CHANNEL RELATED PROTEIN protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8718
95 % 2 2 5744 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 2 2 5770
70 % 2 2 5669
50 % 2 2 5361
40 % 2 2 5039
30 % 2 2 4586

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures