Sequence Similarity Clusters for the Entities in PDB 1LNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H
POTASSIUM CHANNEL RELATED PROTEIN protein, length: 336 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8047
95 % 2 2 5281 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 2 2 5300
70 % 2 2 5237
50 % 2 2 4972
40 % 2 2 4695
30 % 2 2 4273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.