Sequence Similarity Clusters for the Entities in PDB 1LME

Entity #1 | Chains: A,B
peptide deformylase protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43393
95 % 1 1 32835 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 31386
70 % 1 1 27998
50 % 1 1 23893
40 % 38 65 448
30 % 78 121 231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures