Sequence Similarity Clusters for the Entities in PDB 1LME

Entity #1 | Chains: A,B
peptide deformylase protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42457
95 % 1 1 32154 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 30755
70 % 1 1 27479
50 % 1 1 23455
40 % 38 65 432
30 % 78 121 223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.