Sequence Similarity Clusters for the Entities in PDB 1LME

Entity #1 | Chains: A,B
peptide deformylase protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46234
95 % 1 1 38431 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 36665
70 % 1 1 32544
50 % 1 1 27660
40 % 43 76 331
30 % 83 126 241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures