Sequence Similarity Clusters for the Entities in PDB 1LM6

Entity #1 | Chains: A
peptide deformylase DEFB protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15964
95 % 5 8 9652 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 8 9547
70 % 11 21 3072
50 % 15 37 1366
40 % 15 37 1371
30 % 38 123 234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures