Sequence Similarity Clusters for the Entities in PDB 1LM5

Entity #1 | Chains: A,B
subdomain of Desmoplakin Carboxy-Terminal domain (DPCT) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41068
95 % 1 1 31327 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 30038
70 % 1 1 26856
50 % 1 2 17806
40 % 2 3 10757
30 % 2 3 9349

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures