Sequence Similarity Clusters for the Entities in PDB 1LM5

Entity #1 | Chains: A,B
subdomain of Desmoplakin Carboxy-Terminal domain (DPCT) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39921
95 % 1 1 30437 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 29211
70 % 1 1 26225
50 % 1 2 17373
40 % 2 3 10453
30 % 2 3 9074

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.