Sequence Similarity Clusters for the Entities in PDB 1LM4

Entity #1 | Chains: A,B
peptide deformylase PDF1 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13413
95 % 1 9 5994 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 9 6000
70 % 1 9 5859
50 % 2 37 1349
40 % 2 37 1354
30 % 3 122 233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures