Sequence Similarity Clusters for the Entities in PDB 1LM4

Entity #1 | Chains: A,B
peptide deformylase PDF1 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13669
95 % 1 9 6095 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 9 6106
70 % 1 9 5954
50 % 2 37 1367
40 % 2 37 1371
30 % 3 123 235

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures