Sequence Similarity Clusters for the Entities in PDB 1LLP

Entity #1 | Chains: A
LIGNIN PEROXIDASE protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26529
95 % 1 2 23375 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 7991
70 % 1 6 6389
50 % 32 70 663
40 % 32 32 704
30 % 32 65 700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures