Sequence Similarity Clusters for the Entities in PDB 1LL0

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
GLYCOGENIN-1 protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 6163
95 % 8 8 3997 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 8 8 4051
70 % 8 8 3976
50 % 8 8 3878
40 % 8 8 3681
30 % 8 8 3374

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures