Sequence Similarity Clusters for the Entities in PDB 1LKY

Entity #1 | Chains: A,C,E
TRANSCRIPTION FACTOR ETV6 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30251
95 % 1 4 7504 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 4 7452
70 % 1 4 7259
50 % 1 4 6690
40 % 1 4 6232
30 % 1 4 5573
Entity #2 | Chains: B,D,F
TRANSCRIPTION FACTOR ETV6 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30252
95 % 2 4 7504 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 4 7452
70 % 2 4 7259
50 % 2 4 6690
40 % 2 4 6232
30 % 2 4 5573

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures