Sequence Similarity Clusters for the Entities in PDB 1LKY

Entity #1 | Chains: A,C,E
TRANSCRIPTION FACTOR ETV6 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15677
95 % 1 4 7091 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 4 7062
70 % 1 4 6858
50 % 1 4 6368
40 % 1 4 5918
30 % 1 4 5200
Entity #2 | Chains: B,D,F
TRANSCRIPTION FACTOR ETV6 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29100
95 % 2 4 7091 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 4 7062
70 % 2 4 6858
50 % 2 4 6368
40 % 2 4 5918
30 % 2 4 5200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures