Sequence Similarity Clusters for the Entities in PDB 1LKV

Entity #1 | Chains: X
FLAGELLAR MOTOR SWITCH PROTEIN FLIG protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39640
95 % 3 3 22989 Flexibility: High
Max RMSD: 20.0, Avg RMSD: 16.4
PDBFlex
90 % 3 3 22295
70 % 3 3 20445
50 % 3 3 17703
40 % 4 4 10710
30 % 4 4 9314

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures