Sequence Similarity Clusters for the Entities in PDB 1LKT

Entity #1 | Chains: A,B,C,D,E,F
TAILSPIKE PROTEIN protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14150
95 % 1 1 13420 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 13203
70 % 1 1 12419
50 % 1 1 11076
40 % 1 1 10040
30 % 1 1 8751

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures