Sequence Similarity Clusters for the Entities in PDB 1LKP

Entity #1 | Chains: A
Rubrerythrin protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 6935
95 % 1 10 7070 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 10 7050
70 % 1 10 6853
50 % 1 10 6534
40 % 1 10 6061
30 % 2 16 1731

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LKP 1 A Rubrerythrin all-iron (II) form 881
2 1LKO 1 A Rubrerythrin all-iron(II) form 881
3 1LKM 1 A Rubrerythrin all-iron(III) form 881
4 1S2Z 1 A Rubrerythrin 881
5 1QYB 1 A Rubrerythrin 881
6 1DVB 1 A RUBRERYTHRIN 881
7 1B71 1 A PROTEIN (RUBRERYTHRIN) 881
8 1S30 1 A Rubrerythrin 881
9 1RYT 1 A RUBRERYTHRIN 881
10 1JYB 1 A Rubrerythrin 881