Sequence Similarity Clusters for the Entities in PDB 1LKF

Entity #1 | Chains: A
LEUKOCIDIN F SUBUNIT protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10040
95 % 1 7 3977 Flexibility: Medium
Max RMSD: 17.0, Avg RMSD: 5.5
PDBFlex
90 % 1 7 4013
70 % 2 9 3405
50 % 2 9 3335
40 % 2 11 2057
30 % 4 27 600

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.