Sequence Similarity Clusters for the Entities in PDB 1LKF

Entity #1 | Chains: A
LEUKOCIDIN F SUBUNIT protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6382
95 % 1 7 4047 Flexibility: Medium
Max RMSD: 17.0, Avg RMSD: 5.3
PDBFlex
90 % 1 7 4100
70 % 2 9 3544
50 % 2 9 3463
40 % 2 11 2192
30 % 4 25 758

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures