Sequence Similarity Clusters for the Entities in PDB 1LKD

Entity #1 | Chains: A
BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 12160
95 % 1 6 11694 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 6 11533
70 % 1 6 10898
50 % 3 16 4167
40 % 3 18 3031
30 % 7 26 1559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures