Sequence Similarity Clusters for the Entities in PDB 1LKD

Entity #1 | Chains: A
BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 12159
95 % 1 6 11824 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 6 11663
70 % 1 6 11039
50 % 3 16 3886
40 % 3 16 3717
30 % 7 26 1506

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.