Sequence Similarity Clusters for the Entities in PDB 1LJW

Entity #1 | Chains: A
hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 200 21
95 % 160 231 17
90 % 160 231 18
70 % 194 311 15
50 % 458 706 4
40 % 463 711 7
30 % 854 1130 7
Entity #2 | Chains: B
hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 103 153 48
95 % 167 231 16
90 % 170 236 16
70 % 210 325 9
50 % 459 706 4
40 % 464 711 7
30 % 855 1130 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.