Sequence Similarity Clusters for the Entities in PDB 1LJW

Entity #1 | Chains: A
hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 141 208 26
95 % 165 239 33
90 % 166 240 34
70 % 201 321 17
50 % 474 728 4
40 % 479 733 8
30 % 890 1172 8
Entity #2 | Chains: B
hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 158 53
95 % 172 239 31
90 % 175 244 31
70 % 217 335 14
50 % 475 728 4
40 % 480 733 8
30 % 891 1172 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.