Sequence Similarity Clusters for the Entities in PDB 1LJW

Entity #1 | Chains: A
hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 137 201 24
95 % 161 232 18
90 % 161 232 19
70 % 195 312 15
50 % 460 708 4
40 % 465 713 8
30 % 864 1140 7
Entity #2 | Chains: B
hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 103 153 50
95 % 168 232 17
90 % 171 237 18
70 % 211 326 9
50 % 461 708 4
40 % 466 713 8
30 % 865 1140 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.