Sequence Similarity Clusters for the Entities in PDB 1LJP

Entity #1 | Chains: A,B
Beta-elicitin cinnamomin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14561
95 % 3 3 13773 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 3 3 13541
70 % 4 7 7379
50 % 4 7 6800
40 % 4 7 6333
30 % 4 7 5666

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures