Sequence Similarity Clusters for the Entities in PDB 1LJP

Entity #1 | Chains: A,B
Beta-elicitin cinnamomin protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14340
95 % 3 3 13571 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 3 3 13345
70 % 4 7 7282
50 % 4 7 6708
40 % 4 7 6253
30 % 4 7 5590

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures