Sequence Similarity Clusters for the Entities in PDB 1LJM

Entity #1 | Chains: A,B
RUNX1 transcription factor protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 3067
95 % 4 13 2368 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.1
PDBFlex
90 % 4 13 2432
70 % 4 13 2422
50 % 4 13 2408
40 % 4 13 2387
30 % 4 13 2278

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.