Sequence Similarity Clusters for the Entities in PDB 1LJ7

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
C-reactive protein protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 385
95 % 4 6 533 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.4
PDBFlex
90 % 4 6 561
70 % 4 6 594
50 % 14 19 277
40 % 14 19 294
30 % 16 21 296

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures