Sequence Similarity Clusters for the Entities in PDB 1LJ5

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11685
95 % 1 21 1204 Flexibility: Low
Max RMSD: 10.1, Avg RMSD: 2.9
PDBFlex
90 % 1 21 1232
70 % 1 22 1228
50 % 1 22 1288
40 % 2 26 1126
30 % 26 178 183

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.