Sequence Similarity Clusters for the Entities in PDB 1LJ5

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11915
95 % 1 21 1234 Flexibility: Low
Max RMSD: 10.1, Avg RMSD: 2.9
PDBFlex
90 % 1 21 1262
70 % 1 22 1249
50 % 1 22 1311
40 % 2 26 1147
30 % 26 178 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures