Sequence Similarity Clusters for the Entities in PDB 1LJ2

Entity #1 | Chains: A,B
NONSTRUCTURAL RNA-BINDING PROTEIN 34 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44491
95 % 1 1 33315
90 % 1 1 31882
70 % 1 1 28460
50 % 1 1 24353
40 % 1 1 21447
30 % 1 1 18145
Entity #2 | Chains: C,D
eukaryotic protein synthesis initiation factor protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47292
95 % 1 1 35366
90 % 1 1 33831
70 % 1 1 30213
50 % 1 1 25919
40 % 1 1 22932
30 % 1 1 19510

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.