Sequence Similarity Clusters for the Entities in PDB 1LJ2

Entity #1 | Chains: A,B
NONSTRUCTURAL RNA-BINDING PROTEIN 34 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43916
95 % 1 1 32891
90 % 1 1 31488
70 % 1 1 28149
50 % 1 1 24115
40 % 1 1 21243
30 % 1 1 17984
Entity #2 | Chains: C,D
eukaryotic protein synthesis initiation factor protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46674
95 % 1 1 34910
90 % 1 1 33408
70 % 1 1 29889
50 % 1 1 25674
40 % 1 1 22722
30 % 1 1 19345

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.