Sequence Similarity Clusters for the Entities in PDB 1LIA

Entity #1 | Chains: A,K
R-PHYCOERYTHRIN protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43555
95 % 1 1 32935
90 % 1 1 31477
70 % 11 12 74
50 % 11 12 101
40 % 38 54 61
30 % 93 143 18
Entity #2 | Chains: B,L
R-PHYCOERYTHRIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42945
95 % 1 1 32531
90 % 2 2 18648
70 % 13 14 79
50 % 43 62 38
40 % 55 87 24
30 % 94 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures