Sequence Similarity Clusters for the Entities in PDB 1LIA

Entity #1 | Chains: A,K
R-PHYCOERYTHRIN protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41105
95 % 1 1 31078
90 % 1 1 29768
70 % 9 9 1256
50 % 9 9 1297
40 % 32 45 283
30 % 81 120 122
Entity #2 | Chains: B,L
R-PHYCOERYTHRIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40524
95 % 1 1 30698
90 % 2 2 17543
70 % 13 13 1582
50 % 37 53 235
40 % 49 73 197
30 % 82 120 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.