Sequence Similarity Clusters for the Entities in PDB 1LIA

Entity #1 | Chains: A,K
R-PHYCOERYTHRIN protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45224
95 % 1 1 37704
90 % 1 1 35973
70 % 11 12 78
50 % 11 12 108
40 % 38 54 85
30 % 93 143 15
Entity #2 | Chains: B,L
R-PHYCOERYTHRIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45223
95 % 1 1 37703
90 % 2 2 21060
70 % 13 14 86
50 % 43 62 40
40 % 55 87 34
30 % 94 143 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures