Sequence Similarity Clusters for the Entities in PDB 1LIA

Entity #1 | Chains: A,K
R-PHYCOERYTHRIN protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40577
95 % 1 1 30691
90 % 1 1 29411
70 % 9 9 1228
50 % 9 9 1274
40 % 31 44 287
30 % 79 118 127
Entity #2 | Chains: B,L
R-PHYCOERYTHRIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40003
95 % 1 1 30317
90 % 2 2 17311
70 % 13 13 1558
50 % 36 52 231
40 % 48 72 194
30 % 80 118 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.