Sequence Similarity Clusters for the Entities in PDB 1LHD

Entity #1 | Chains: L
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 268 328 43
95 % 269 329 58
90 % 269 329 63
70 % 270 331 74
50 % 270 331 100
40 % 270 331 124
30 % 270 331 135
Entity #2 | Chains: H
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 233 283 53
95 % 300 367 35
90 % 304 374 36
70 % 315 398 41
50 % 315 398 75
40 % 1345 1617 4
30 % 1456 1759 6
Entity #3 | Chains: I
HIRUDIN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.