Sequence Similarity Clusters for the Entities in PDB 1LHC

Entity #1 | Chains: L
ALPHA-THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 183 335 45
95 % 183 336 60
90 % 183 336 65
70 % 183 338 76
50 % 183 338 101
40 % 183 338 125
30 % 183 338 137
Entity #2 | Chains: H
ALPHA-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 162 290 55
95 % 200 374 35
90 % 202 381 38
70 % 202 405 44
50 % 202 405 78
40 % 1048 1684 4
30 % 1125 1833 6
Entity #3 | Chains: I
HIRUDIN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.