Sequence Similarity Clusters for the Entities in PDB 1LGN

Entity #1 | Chains: A,B,C,D,E
SERUM AMYLOID P COMPONENT protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 357
95 % 11 13 492 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 11 13 527
70 % 11 13 559
50 % 15 19 276
40 % 15 19 293
30 % 17 21 295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures