Sequence Similarity Clusters for the Entities in PDB 1LGH

Entity #1 | Chains: A,D,G,J
LIGHT HARVESTING COMPLEX II protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23167
95 % 1 1 19765
90 % 1 1 19232
70 % 1 1 17744
50 % 1 1 15483
40 % 1 1 13824
30 % 1 1 11846
Entity #2 | Chains: B,E,H,K
LIGHT HARVESTING COMPLEX II protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23241
95 % 1 1 19834
90 % 1 1 19300
70 % 1 1 17807
50 % 1 1 15537
40 % 1 1 13875
30 % 1 8 338

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.