Sequence Similarity Clusters for the Entities in PDB 1LGH

Entity #1 | Chains: A,D,G,J
LIGHT HARVESTING COMPLEX II protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23019
95 % 1 1 19633
90 % 1 1 19105
70 % 1 1 17632
50 % 1 1 15386
40 % 1 1 13737
30 % 1 1 11773
Entity #2 | Chains: B,E,H,K
LIGHT HARVESTING COMPLEX II protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23093
95 % 1 1 19702
90 % 1 1 19173
70 % 1 1 17695
50 % 1 1 15440
40 % 1 1 13788
30 % 1 8 336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.