Sequence Similarity Clusters for the Entities in PDB 1LGH

Entity #1 | Chains: A,D,G,J
LIGHT HARVESTING COMPLEX II protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22395
95 % 1 1 19119
90 % 1 1 18606
70 % 1 1 17181
50 % 1 1 15010
40 % 1 1 13413
30 % 1 1 11500
Entity #2 | Chains: B,E,H,K
LIGHT HARVESTING COMPLEX II protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22465
95 % 1 1 19184
90 % 1 1 18668
70 % 1 1 17238
50 % 1 1 15058
40 % 1 1 13459
30 % 1 6 624

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.