Sequence Similarity Clusters for the Entities in PDB 1LGH

Entity #1 | Chains: A,D,G,J
LIGHT HARVESTING COMPLEX II protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22878
95 % 1 1 19529
90 % 1 1 19007
70 % 1 1 17552
50 % 1 1 15321
40 % 1 1 13677
30 % 1 1 11727
Entity #2 | Chains: B,E,H,K
LIGHT HARVESTING COMPLEX II protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22953
95 % 1 1 19599
90 % 1 1 19076
70 % 1 1 17616
50 % 1 1 15375
40 % 1 1 13728
30 % 1 6 635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.