Sequence Similarity Clusters for the Entities in PDB 1LGB

Entity #1 | Chains: A
LEGUME ISOLECTIN II (ALPHA CHAIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61691
95 % 10 10 2233
90 % 19 19 1216
70 % 20 20 1195
50 % 20 20 1250
40 % 20 20 1265
30 % 20 20 1238
Entity #2 | Chains: B
LEGUME ISOLECTIN II (BETA CHAIN) protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72179
95 % 10 10 2257
90 % 10 10 2323
70 % 20 20 1200
50 % 20 20 1256
40 % 20 20 1272
30 % 20 20 1245
Entity #3 | Chains: C
LACTOTRANSFERRIN (N2 FRAGMENT) protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63211
95 % 1 1 43789
90 % 1 1 41577
70 % 1 1 36595
50 % 4 4 14940
40 % 4 4 13304
30 % 4 4 11382

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.