Sequence Similarity Clusters for the Entities in PDB 1LGA

Entity #1 | Chains: A,B
LIGNIN PEROXIDASE protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29153
95 % 2 2 24710 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 6 6 8013
70 % 6 7 6639
50 % 42 57 889
40 % 53 71 752
30 % 53 71 788

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures