Sequence Similarity Clusters for the Entities in PDB 1LFV

Entity #1 | Chains: A
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 181 214 22
95 % 211 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 212 246 21
70 % 271 327 15
50 % 635 744 4
40 % 640 749 8
30 % 1075 1198 8
Entity #2 | Chains: B
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 138 164 51
95 % 216 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 220 250 19
70 % 289 341 12
50 % 636 744 4
40 % 641 749 8
30 % 1076 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.