Sequence Similarity Clusters for the Entities in PDB 1LFT

Entity #1 | Chains: A
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 165 208 26
95 % 193 239 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 194 240 35
70 % 242 321 18
50 % 575 730 5
40 % 580 735 9
30 % 1001 1175 8
Entity #2 | Chains: B
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 126 158 53
95 % 199 239 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 203 244 31
70 % 260 335 14
50 % 576 730 5
40 % 581 735 9
30 % 1002 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.