Sequence Similarity Clusters for the Entities in PDB 1LFQ

Entity #1 | Chains: A
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 166 209 26
95 % 194 240 34
90 % 195 241 35
70 % 243 322 17
50 % 579 734 5
40 % 584 739 8
30 % 1008 1182 8
Entity #2 | Chains: B
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 127 159 53
95 % 200 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 204 245 32
70 % 261 336 13
50 % 580 734 5
40 % 585 739 8
30 % 1009 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.