Sequence Similarity Clusters for the Entities in PDB 1LFL

Entity #1 | Chains: A,C,P,R
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 171 214 22
95 % 199 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 200 246 21
70 % 250 327 15
50 % 593 744 4
40 % 598 749 8
30 % 1028 1198 8
Entity #2 | Chains: B,D,Q,S
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 130 164 51
95 % 205 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 209 250 19
70 % 268 341 12
50 % 594 744 4
40 % 599 749 8
30 % 1029 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.