Sequence Similarity Clusters for the Entities in PDB 1LFD

Entity #1 | Chains: A,C
RALGDS protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44342
95 % 1 1 33076
90 % 1 2 22042
70 % 1 2 20187
50 % 1 3 14931
40 % 1 3 13328
30 % 1 3 11419
Entity #2 | Chains: B,D
RAS protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40033
95 % 84 142 207
90 % 124 187 126
70 % 124 187 144
50 % 150 233 129
40 % 237 419 24
30 % 356 727 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.