Sequence Similarity Clusters for the Entities in PDB 1LFD

Entity #1 | Chains: A,C
RALGDS protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45439
95 % 1 1 33919
90 % 1 2 22582
70 % 1 2 20670
50 % 1 3 15237
40 % 1 3 13598
30 % 1 3 11647
Entity #2 | Chains: B,D
RAS protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41014
95 % 84 142 216
90 % 127 191 127
70 % 127 191 145
50 % 153 237 129
40 % 240 423 26
30 % 363 745 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.