Sequence Similarity Clusters for the Entities in PDB 1LFD

Entity #1 | Chains: A,C
RALGDS protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47138
95 % 1 1 35207
90 % 1 2 23510
70 % 1 2 21422
50 % 1 3 15768
40 % 1 3 14065
30 % 1 3 12031
Entity #2 | Chains: B,D
RAS protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42576
95 % 87 146 222
90 % 138 206 117
70 % 140 208 127
50 % 166 255 114
40 % 253 441 23
30 % 378 772 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.