Sequence Similarity Clusters for the Entities in PDB 1LFA

Entity #1 | Chains: A,B
CD11A protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 2891
95 % 8 29 800 Flexibility: Low
Max RMSD: 9.3, Avg RMSD: 1.9
PDBFlex
90 % 8 29 828
70 % 8 29 865
50 % 8 29 919
40 % 8 29 946
30 % 13 58 479

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1MF7 1 A INTEGRIN ALPHA M I domain 9606
2 1MJN 1 A Integrin alpha-L Intermediate Affinity aL I Domain 9606
3 5HGJ 1 A, B Integrin alpha-1 Extracellular VWFA domain residues 170-364 9606
4 3F78 1 A, B, C Integrin alpha-L UNP residues 153-332, VWFA domain, I domain 9606
5 1NA5 1 A Integrin alpha-M Alpha M I domain 9606
6 2ICA 1 A Integrin alpha-L VWFA domain, residues 154-332 9606
7 3F74 1 A, B, C Integrin alpha-L UNP residues 153-332, VWFA domain, I domain 9606
8 1N3Y 1 A Integrin alpha-X I domain 9606
9 1IDO 1 A INTEGRIN I-DOMAIN 9606
10 4IXD 1 A Integrin alpha-L I-DOMAIN, UNP residues 152-336 9606
11 1T0P 1 A Integrin alpha-L I domain 9606
12 1XUO 1 A, B Integrin alpha-L I-domain 9606
13 1LFA 1 A, B CD11A 9606
14 2O7N 1 A Integrin alpha-L VWFA DOMAIN, RESIDUES 154-332 9606
15 3BQN 1 B, C Integrin alpha-L VWFA DOMAIN 9606
16 3M6F 1 A Integrin alpha-L UNP residues 154-332 9606
17 1PT6 1 A, B Integrin alpha-1 residue 136-338 9606
18 4A0Q 1 A, B INTEGRIN ALPHA-1 INTEGRIN ALPHA1 I-DOMAIN, RESIDUES 166-366 9606
19 1V7P 3 C Integrin alpha-2 RESIDUES 138-337 9606
20 1ZON 1 A LEUKOCYTE ADHESION GLYCOPROTEIN I-DOMAIN FRAGMENT OF LFA-1 9606
21 4XW2 1 A Integrin alpha-M The discrepancies come from the expression vector UNP residues 145-337 9606
22 1ZOP 1 A, B I-DOMAIN FRAGMENT OF LFA-1 9606
23 1QC5 1 A PROTEIN (ALPHA1 BETA1 INTEGRIN) I-DOMAIN 9606
24 1QC5 2 B PROTEIN (ALPHA1 BETA1 INTEGRIN) I-DOMAIN 9606
25 1XDD 1 A, B Integrin alpha-L I-domain 9606
26 1MQ9 1 A Integrin alpha-L Integrin alphaL I domain 9606
27 1XDG 1 A, B Integrin alpha-L I-domain 9606
28 3BN3 1 A Integrin alpha-L I domain 9606
29 3E2M 1 A, B Integrin alpha-L VWFA DOMAIN 9606
30 1JLM 1 A INTEGRIN I-DOMAIN 9606
31 3BQM 1 B, C Integrin alpha-L VWFA domain 9606
32 1DZI 1 A INTEGRIN ALPHA2 I DOMAIN 9606
33 3HI6 1 A, B Integrin alpha-L UNP residues 153-332 9606
34 1AOX 1 A, B INTEGRIN ALPHA 2 BETA I DOMAIN 9606
35 1M1U 1 A Integrin alpha-M CD11b A-domain, Residues 123-315 9606
36 1QCY 1 A I-DOMAIN OF INTEGRIN ALPHA1BETA1 FRAGMENT, I-DOMAIN OF HUMAN INTEGRIN A1B1 9606
37 5HJ2 1 A, B, C, D, E, F Integrin alpha-2 VWFA domain residues 170-366 9606
38 1CK4 1 A, B INTEGRIN ALPHA-1 I-DOMAIN 10116
39 1IDN 1 1, 2 CD11B MAC-1 ALPHA DOMAIN 9606
40 1BHQ 1 1, 2 CD11B MAC-1 ALPHA DOMAIN 9606
41 1CQP 1 A, B ANTIGEN CD11A (P180) COMPLEXED WITH LOVASTATIN WHICH OCCURS NATURALLY IN FUNGI I-DOMAIN, RESIDUES 153-334 9606
42 1BHO 1 1, 2 CD11B MAC-1 ALPHA DOMAIN 9606
43 1RD4 1 A, B, C, D Integrin alpha-L I Domain, residues 125-311 9606
44 4M76 2 B Integrin alpha-M unp residues 143-337 9606
45 3Q3G 3 E, G, I, L Integrin alpha-M UNP residues 148-337 9606
46 1N9Z 1 A Integrin alpha-M alpha M I domain 9606
47 1MQA 1 A Integrin alpha-L Integrin alphaL I domain 9606
48 3QA3 3 E, G, I, L Integrin alpha-M UNP residues 148-337 9606
49 1MHP 1 A, B integrin alpha 1, (RESIDUES 169-360) alpha1 I-domain 10116
50 3EOA 3 I, J Integrin alpha-L I domain 9606
51 5THP 3 C, F, I, L, O, R Integrin alpha-2 UNP residues 170-366 9606
52 4BJ3 1 A, B INTEGRIN ALPHA-2 I DOMAIN, RESIDUES 171-368 9606
53 3TCX 2 B, D, F, H, J, L, N, P, R, T, V, X, Z, b Integrin alpha-L I DOMAIN, unp residues 154-332 9606
54 1ZOO 1 A, B LEUKOCYTE ADHESION GLYCOPROTEIN I-DOMAIN FRAGMENT OF LFA-1 9606
55 1MQ8 2 B, D Integrin alpha-L Integrin alphaL I domain 9606
56 3EOB 3 I, J Integrin alpha-L I domain 9606
57 2M32 1 A Integrin alpha-1 9606
58 1DGQ 1 A LEUKOCYTE FUNCTION ASSOCIATED ANTIGEN-1 INSERTED DOMAIN 9606