Sequence Similarity Clusters for the Entities in PDB 1LFA

Entity #1 | Chains: A,B
CD11A protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 2829
95 % 8 29 784 Flexibility: Low
Max RMSD: 9.3, Avg RMSD: 2.0
PDBFlex
90 % 8 29 812
70 % 8 29 854
50 % 8 29 909
40 % 8 29 932
30 % 13 58 469

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1MF7 1 A INTEGRIN ALPHA M I domain 9606
2 1MJN 1 A Integrin alpha-L Intermediate Affinity aL I Domain 9606
3 5HGJ 1 A, B Integrin alpha-1 Extracellular VWFA domain residues 170-364 9606
4 3F78 1 A, B, C Integrin alpha-L UNP residues 153-332, VWFA domain, I domain 9606
5 1NA5 1 A Integrin alpha-M Alpha M I domain 9606
6 2ICA 1 A Integrin alpha-L VWFA domain, residues 154-332 9606
7 3F74 1 A, B, C Integrin alpha-L UNP residues 153-332, VWFA domain, I domain 9606
8 1N3Y 1 A Integrin alpha-X I domain 9606
9 1IDO 1 A INTEGRIN I-DOMAIN 9606
10 4IXD 1 A Integrin alpha-L I-DOMAIN, UNP residues 152-336 9606
11 1T0P 1 A Integrin alpha-L I domain 9606
12 1XUO 1 A, B Integrin alpha-L I-domain 9606
13 1LFA 1 A, B CD11A 9606
14 2O7N 1 A Integrin alpha-L VWFA DOMAIN, RESIDUES 154-332 9606
15 3BQN 1 B, C Integrin alpha-L VWFA DOMAIN 9606
16 3M6F 1 A Integrin alpha-L UNP residues 154-332 9606
17 1PT6 1 A, B Integrin alpha-1 residue 136-338 9606
18 4A0Q 1 A, B INTEGRIN ALPHA-1 INTEGRIN ALPHA1 I-DOMAIN, RESIDUES 166-366 9606
19 1V7P 3 C Integrin alpha-2 RESIDUES 138-337 9606
20 1ZON 1 A LEUKOCYTE ADHESION GLYCOPROTEIN I-DOMAIN FRAGMENT OF LFA-1 9606
21 4XW2 1 A Integrin alpha-M The discrepancies come from the expression vector UNP residues 145-337 9606
22 1ZOP 1 A, B I-DOMAIN FRAGMENT OF LFA-1 9606
23 1QC5 1 A PROTEIN (ALPHA1 BETA1 INTEGRIN) I-DOMAIN 9606
24 1QC5 2 B PROTEIN (ALPHA1 BETA1 INTEGRIN) I-DOMAIN 9606
25 1XDD 1 A, B Integrin alpha-L I-domain 9606
26 1MQ9 1 A Integrin alpha-L Integrin alphaL I domain 9606
27 1XDG 1 A, B Integrin alpha-L I-domain 9606
28 3BN3 1 A Integrin alpha-L I domain 9606
29 3E2M 1 A, B Integrin alpha-L VWFA DOMAIN 9606
30 1JLM 1 A INTEGRIN I-DOMAIN 9606
31 3BQM 1 B, C Integrin alpha-L VWFA domain 9606
32 1DZI 1 A INTEGRIN ALPHA2 I DOMAIN 9606
33 3HI6 1 A, B Integrin alpha-L UNP residues 153-332 9606
34 1AOX 1 A, B INTEGRIN ALPHA 2 BETA I DOMAIN 9606
35 1M1U 1 A Integrin alpha-M CD11b A-domain, Residues 123-315 9606
36 1QCY 1 A I-DOMAIN OF INTEGRIN ALPHA1BETA1 FRAGMENT, I-DOMAIN OF HUMAN INTEGRIN A1B1 9606
37 5HJ2 1 A, B, C, D, E, F Integrin alpha-2 VWFA domain residues 170-366 9606
38 1CK4 1 A, B INTEGRIN ALPHA-1 I-DOMAIN 10116
39 1IDN 1 1, 2 CD11B MAC-1 ALPHA DOMAIN 9606
40 1BHQ 1 1, 2 CD11B MAC-1 ALPHA DOMAIN 9606
41 1CQP 1 A, B ANTIGEN CD11A (P180) COMPLEXED WITH LOVASTATIN WHICH OCCURS NATURALLY IN FUNGI I-DOMAIN, RESIDUES 153-334 9606
42 1BHO 1 1, 2 CD11B MAC-1 ALPHA DOMAIN 9606
43 1RD4 1 A, B, C, D Integrin alpha-L I Domain, residues 125-311 9606
44 4M76 2 B Integrin alpha-M unp residues 143-337 9606
45 3Q3G 3 E, G, I, L Integrin alpha-M UNP residues 148-337 9606
46 1N9Z 1 A Integrin alpha-M alpha M I domain 9606
47 1MQA 1 A Integrin alpha-L Integrin alphaL I domain 9606
48 3QA3 3 E, G, I, L Integrin alpha-M UNP residues 148-337 9606
49 1MHP 1 A, B integrin alpha 1, (RESIDUES 169-360) alpha1 I-domain 10116
50 3EOA 3 I, J Integrin alpha-L I domain 9606
51 5THP 3 C, F, I, L, O, R Integrin alpha-2 UNP residues 170-366 9606
52 4BJ3 1 A, B INTEGRIN ALPHA-2 I DOMAIN, RESIDUES 171-368 9606
53 3TCX 2 B, D, F, H, J, L, N, P, R, T, V, X, Z, b Integrin alpha-L I DOMAIN, unp residues 154-332 9606
54 1ZOO 1 A, B LEUKOCYTE ADHESION GLYCOPROTEIN I-DOMAIN FRAGMENT OF LFA-1 9606
55 1MQ8 2 B, D Integrin alpha-L Integrin alphaL I domain 9606
56 3EOB 3 I, J Integrin alpha-L I domain 9606
57 2M32 1 A Integrin alpha-1 9606
58 1DGQ 1 A LEUKOCYTE FUNCTION ASSOCIATED ANTIGEN-1 INSERTED DOMAIN 9606