Sequence Similarity Clusters for the Entities in PDB 1LF8

Entity #1 | Chains: A,B,C,D
ADP-ribosylation factor binding protein GGA3 protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 4730
95 % 2 3 5372
90 % 2 3 5381
70 % 9 13 1572
50 % 10 14 1512
40 % 10 14 1541
30 % 10 14 1499
Entity #2 | Chains: E,F,G,H
Cation-independent mannose-6-phosphate receptor protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.