Sequence Similarity Clusters for the Entities in PDB 1LF4

Entity #1 | Chains: A
Plasmepsin 2 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 13 1932
95 % 6 20 1296 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 6 20 1326
70 % 6 26 1007
50 % 6 29 934
40 % 6 29 963
30 % 576 737 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2IGX 1 A Plasmepsin-2 5833 3.4.23.39 | Details
2 1XDH 1 A, B Plasmepsin 2 5833 3.4.23.39 | Details
3 1LF4 1 A Plasmepsin 2 5833 3.4.23.39 | Details
4 4Y6M 1 A, B, C Plasmepsin-2 UNP residues 125-453 5833 3.4.23.39 | Details
5 1W6H 1 A, B PLASMEPSIN 2 5833 3.4.23.39 | Details
6 1XE5 1 A, B Plasmepsin 2 5833 3.4.23.39 | Details
7 1LF3 1 A plasmepsin 2 Residues 123-453 5833 3.4.23.39 | Details
8 1SME 1 A, B PLASMEPSIN II 5833 3.4.23.39 | Details
9 2IGY 1 A, B Plasmepsin-2 5833 3.4.23.39 | Details
10 1ME6 1 A, B Plasmepsin II RESIDUES 125-453 5833 3.4.23.39 | Details
11 1W6I 1 A, C PLASMEPSIN 2 PRECURSOR 5833 3.4.23.39 | Details
12 1XE6 1 A, B Plasmepsin 2 5833 3.4.23.39 | Details
13 2R9B 1 A, B Plasmepsin-2 5833 3.4.23.39 | Details