Sequence Similarity Clusters for the Entities in PDB 1LEN

Entity #1 | Chains: A,C
LECTIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10561
95 % 1 4 10586 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 19 1231
70 % 3 20 1213
50 % 3 20 1264
40 % 3 20 1276
30 % 3 20 1248
Entity #2 | Chains: B,D
LECTIN protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16158
95 % 1 4 10891 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 4 10746
70 % 3 20 1219
50 % 3 20 1271
40 % 3 20 1284
30 % 3 20 1256

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.