Sequence Similarity Clusters for the Entities in PDB 1LEM

Entity #1 | Chains: A
LECTIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10729
95 % 4 4 10729 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 18 19 1250
70 % 18 20 1224
50 % 18 20 1282
40 % 18 20 1293
30 % 18 20 1267
Entity #2 | Chains: B
LECTIN protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16427
95 % 4 4 11037 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 10892
70 % 18 20 1230
50 % 18 20 1289
40 % 18 20 1302
30 % 18 20 1278

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures