Sequence Similarity Clusters for the Entities in PDB 1LEL

Entity #1 | Chains: A,B
Avidin protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 2169
95 % 25 26 695 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 27 28 671
70 % 39 41 387
50 % 43 45 438
40 % 43 45 461
30 % 200 203 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures